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People

John Wenskovitch

Projects Themes Talks Publications

Webpage

Projects

Mosbie: Exploring Exploring Cell Pathway Rule-Based Model Development over Time
RuleBender: Visual Debuggers for Diagram-Based Biological Models
Bioinformatics Visualization: Fixing Protein Sequences

Themes

Visual Analysis in Science and Engineering
BioVis: Bioinformatics and Computational Biology Visualization
Precision Medicine and Medical Image Analysis

Talks

Fixing TIM: Identifying Functional Mutations in Protein Families through the Interactive Exploration of Sequence and Structural Data
Fixing TIM (Full Talk)

 



 

Publications

2014

T. Luciani, J. Wenskovitch, K. Chen, D. Koes, T. Travers, G.E. Marai, "FixingTIM: Interactive Exploration of Sequence and Structural Data to Identify Functional Mutations in Protein Families", BMC Proceedings 2014, 8(Suppl 2):S3, Vol. 0(8), pp. 1--9, Aug 2014. (pdf) (bibtex: Luciani-2014-FIE).
J. Wenskovitch, L.A. Harris, J.J. Tapia, J.R. Faeder, G.E. Marai, "MOSBIE: A Tool for Comparison and Analysis of Rule-Based Biochemical Models", BMC Bioinformatics Journal 15:316, Vol. 15(0), pp. 1--22, 2014. (pdf) (bibtex: Wenskovitch-2014-MAT).

2013


J. Wenskovitch, L. Harris, J. Faeder, G.E. Marai, "A Journaling System for Rule-Based Biochemical Models", IEEE BioVis Posters Compendium, pp. 1--1, 2013. (pdf) (bibtex: Wenskovitch-2013-AJS).
IEEE BioVis'13 Data Contest Visualization Award
J. Wenskovitch, T. Luciani, K. Chen, G.E. Marai, "Fixing TIM: Identifying Functional Mutations in Protein Families through the Interactive Exploration of Sequence and Structural Data", IEEE BioVis 2013 Data Competition, pp. 1--4, 2013. (pdf) (bibtex: Wenskovitch-2013-FTI).

2011


S.D. Rothenberger, J.E. Wenskovitch, G.E. Marai, "Pexel and Heatmap Visual Analysis of Multidimensional Gun/Homicide Data", IEEE Visualization 2011, Visual Analytics Science and Technology (VAST) Conference, Poster Abstracts with System Demonstration, pp. 1--2, Oct 2011. (pdf) (bibtex: Rothenberger-2011-PAH).
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